BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036E06LP1|AL430242
(920 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1675 1789 0.0
>3x_Contig1675
Length = 13954
Score = 1789 bits (898), Expect = 0.0
Identities = 911/920 (99%)
Strand = Plus / Minus
Query: 1 aagccacgtgacatgtatagttacatatcacaacacatcatgaagattaccggaatacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4175 aagccacgtgacatgtatagttacatatcacaacacatcatgaagattaccggaatacaa 4116
Query: 61 aagggtcgccaacataattttgggtcacgtgtaagatagtatcggtcttacccggtccga 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 4115 aagggtcgccaacataattttgggtcacgtgtaagaaagtatcggtcttacccggtccga 4056
Query: 121 gtwattcaacgagtgtwcccgtttctgcattcgccagttagcagacccataacatacagc 180
|| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4055 gtaattcaacgagtgtacccgtttctgcattcgccagtaagcagacccataacatacagc 3996
Query: 181 agggtagaacaactcgccttgtgggacttgtgggtgtwatcaaatatccctaatatgaac 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3995 agggtagaacaactcgccttgtgggacttgtgggtgtaatcaaatatccctaatatgaac 3936
Query: 241 agagtaaagtactatgactaaatcttttttttttcttgcggccggcattgcttctcggta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3935 agagtaaagtactatgactaaatcttttttttttcttgcggccggcattgcttctcggta 3876
Query: 301 tcgcaacaataatacctactgactttttcaaattattaatgaattctggattttgatgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3875 tcgcaacaataatacctactgactttttcaaattattaatgaattctggattttgatgta 3816
Query: 361 tatatatwawgtwagaagttcacattgctgatatttcaagacattttctgtgcgattagc 420
||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3815 tatatataaagtaagaagttcacattgctgatatttcaagacattttctgtgcgattagc 3756
Query: 421 gagacagtkaatagttattggtcgatcttgtttctatcattaaccgttttatttatcagc 480
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3755 gagacagtgaatagttattggtcgatcttgtttctatcattaaccgttttatttatcagc 3696
Query: 481 catcaaccacaattacaatacatctttcaaaaatgccaagtgccgcaacaatcgctcgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3695 catcaaccacaattacaatacatctttcaaaaatgccaagtgccgcaacaatcgctcgtg 3636
Query: 541 tccaaggtttaatcaactcatctaagatctttgtcgcttcaaagacatactgtccatact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3635 tccaaggtttaatcaactcatctaagatctttgtcgcttcaaagacatactgtccatact 3576
Query: 601 gccaagccactttgaaaactttgtttgaagaaaagaaggtggacaaaaagttggctactg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3575 gccaagccactttgaaaactttgtttgaagaaaagaaggtggacaaaaagttggctactg 3516
Query: 661 ttttgcaattgaaccaactagaagatggttccgatattcaggatgctttggcagaaatta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3515 ttttgcaattgaaccaactagaagatggttccgatattcaggatgctttggcagaaatta 3456
Query: 721 ccggccaaaagactgttccaaacatctttattaatggcaagcacatcggtggtaactctg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3455 ccggccaaaagactgttccaaacatctttattaatggcaagcacatcggtggtaactctg 3396
Query: 781 atttgcaagagttgaacaactccggtgatttggataagttgttggcttccttataaagtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3395 atttgcaagagttgaacaactccggtgatttggataagttgttggcttccttataaagtt 3336
Query: 841 gaattttctcaagcagcttcatattagctggatagatttgaatatcaccattgaccaatg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3335 gaattttctcaagcagcttcatattagctggatagatttgaatatcaccattgaccaatg 3276
Query: 901 atgggtttttcttttcgttc 920
||||||||||||||||||||
Sbjct: 3275 atgggtttttcttttcgttc 3256
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8874
Number of Sequences: 1807
Number of extensions: 8874
Number of successful extensions: 75
Number of sequences better than 1.0e-20: 1
length of query: 920
length of database: 10,358,551
effective HSP length: 16
effective length of query: 904
effective length of database: 10,329,639
effective search space: 9337993656
effective search space used: 9337993656
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)